Publikacje 2013

  1. Baojiu Li , Barreira Alexandre , Baugh Carlton , Hellwing Wojciech , Hellwing Wojciech , Koyama Kazuya , Pascoli Silvia , Zhao Gong-Bo , Simulating the quartic Galileon gravity model on adaptively refined meshes, JOURNAL OF COSMOLOGY AND ASTROPARTICLE PHYSICS, 2013, s. 1-41
  2. Hellwing Wojciech , Hellwing Wojciech , Baojiu Li , Frenk Carlos , Cole Shaun , Hierarchical clustering in chameleon f(R) gravity, MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, 2013, 435, s. 2806-2821
  3. Barreira Alexandre , Baojiu Li , Hellwing Wojciech , Hellwing Wojciech , Baugh Carlton , Pascoli Silvia , Nonlinear structure formation in the cubic Galileon gravity model, JOURNAL OF COSMOLOGY AND ASTROPARTICLE PHYSICS, 2013, s. 1-31
  4. Park Changbom , Pranav Pratyush , Chingangbam Pravabati , van de Weygaert Rien , Jones Bernard , Vegter Gert , Kim Inkang , Hidding Johan , Hellwing Wojciech , Hellwing Wojciech , BETTI NUMBERS OF GAUSSIAN FIELDS, Journal of the Korean Astronomical Society, 2013, 46, s. 125-131
  5. Sriwastava B. , Basu S. , Maulik U. , Plewczyński Dariusz , PPIcons: identification of protein-protein interaction sites in selected organisms., JOURNAL OF MOLECULAR MODELING, 2013, 19, s. 4059-4070
  6. Strąk Paweł , Kempisty Paweł , Ptasińska Maria , Krukowski Stanisław , Krukowski Stanisław , Principal physical properties of GaN/AlN multiquantum well systems determined by density functional theory calculations, Journal of Applied Physics, 2013, 113, s. 1-15
  7. Peszyńska Małgorzata , Trykozko Anna , Pore-to-core simulations of flow with large velocities using continuum models and imaging data, COMPUTATIONAL GEOSCIENCES, 2013, 17, s. 623-645
  8. Krukowski Stanisław , Krukowski Stanisław , Kempisty Paweł , Strąk Paweł , Fermi level influence on the adsorption at semiconductor surfaces - ab initio simulations,, Journal of Applied Physics, 2013, 114, s. 1-21
  9. Wendykier Piotr , Deduplication of Metadata Harvested from Open Archives Initiative Repositories W: Mining the Digital Information Networks , on-line, 2013
  10. Aghaeepour Nima , Finak Greg , Consortium The FlowCAP , Consortium The DREAM , Hoos Holger , Mosmann Tim , Brinkman Ryan , Gottardo Raphael , Scheuermann Richard , Kursa Miron , Rudnicki Witold , Critical assessment of automated flow cytometry data analysis techniques, NATURE METHODS, 2013, 10, s. 228-238
  11. Zamłyńska Katarzyna , DML-PL Polska Matematyczna Biblioteka Cyfrowa W: Bibliograficzne bazy danych i ich rola w rozwoju nauki, Poznań, 17-19 kwietnia 2013 ed. Sójkowska Iwona , Derfert-Wolf Lidia , , 2013
  12. Rahman Mohammad Motiur , Mithun Kumar P.K. , Borucki Bartosz , Nowinski Krzysztof S. , Uddin Mohammad Shorif , Speckle noise reduction of ultrasound images using Extra-Energy Reduction function W: Informatics, Electronics Vision (ICIEV), 2013 International Conference on ed. Informatics, Electronics & Vision (ICIEV), 2013 International Conference on , , 2013, s. 1-6
  13. Bieniasz-Krzywiec Ł. , Cytowski Maciej , Rychlewski L. , Plewczyński Dariusz , 3D-Hit: fast structural comparison of proteins on multicore architectures, Optimization Letters, 2013, s. 1-12
  14. Cytowski Maciej , Szymańska Zuzanna , Borucki Bartosz , A 2-D Large-scale Individual-based model of solid tumour growth W: The proceedings of Fifth Polish-Japanese Days on Nonlinear Analysis in Interdisciplinary Sciences-Modellings, Theory and Simulations ed. Aiki Toyohiko , Fukao Takeshi , Kenmochi Nobuyuki , Niezgódka Marek , Ôtani Mitsuharu , , Tokyo, Gakkotosho, 2013, s. 340
  15. Colombo Rinaldo , Goatin Paola , Rosini Massimiliano Daniele , A Macroscopic model for Pedestrian Flows in Panic Situations W: The proceedings of Fifth Polish-Japanese Days on Nonlinear Analysis in Interdisciplinary Sciences-Modellings, Theory and Simulations ed. Aiki Toyohiko , Fukao Takeshi , Kenmochi Nobuyuki , Niezgódka Marek , Ôtani Mitsuharu , , Tokyo, Gakkotosho, 2013, s. 340
  16. Nowiński Aleksander , Sylwestrzak Wojtek , Fenrich Wojciech , Polska Bibliografia Naukowa W: Bibliograficzne bazy danych i ich rola w rozwoju nauki, Poznań, 17-19 kwietnia 2013 ed. Sójkowska Iwona , Derfert-Wolf Lidia , , 2013
  17. Saha Indrajit , Mazzoco Giovanni , Plewczyński Dariusz , Consensus classification of human leukocyte anigen class II proteins, Immunogenetics, 2013, 65, s. 97-105
  18. The proceedings of Fifth Polish-Japanese Days on Nonlinear Analysis in Interdisciplinary Sciences-Modellings, Theory and Simulations ed. Aiki Toyohiko , Fukao Takeshi , Kenmochi Nobuyuki , Niezgódka Marek , Ôtani Mitsuharu , , Tokyo, Gakkotosho, 2013
  19. Rosini Massimiliano Daniele , Macroscopic Models for Vehicular Flows and Crowd Dynamics: Theory and Applications , Niemcy, © Springer, 2013
  20. Kapiński Norbert , Borucki Bartosz , Nowiński Krzysztof , Error assessment and minimization in 4D motion tracking for functional orthopaedics diagnostics, International Journal of Computer Assisted Radiology and Surgery, 2013, 8, s. 157-159
  21. Juszkiewicz Roman , Hellwing Wojciech , Hellwing Wojciech , Skewness as a probe of baryon acoustic oscillations, MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, 2013, 429, s. 1206-1212
  22. Li Baojiu , Hellwing Wojciech , Hellwing Wojciech , Koyama Kazuya , Zhao Gong-Bo , Jennings Elise , Baugh Carlton M. , The nonlinear matter and velocity power spectra in f(R) gravity, MONTHLY NOTICES OF THE ROYAL ASTRONOMICAL SOCIETY, 2013, 428, s. 743-755
  23. Rosiek Tomasz , Sylwestrzak Wojtek , Nowiński Aleksander , Niezgódka Marek , Infrastructural Approach to Modern Digital Library and Repository Management Systems W: Intelligent Tools or Building a Scientific Information Platform - Advanced Architectures and Solutions ed. Bembenik Robert , Skonieczny Lukasz , Rybiński Henryk , Kryszkiewicz Marzena , Niezgódka Marek , , Berlin - Heidelberg - New York - Dordrecht - London, Springer-Verlag, 2013, s. 546
  24. Dendek Piotr , Wojewódzki Mariusz , Bolikowski Łukasz , Author Disambiguation in the YADDA2 Software Platform W: Intelligent Tools for Building a Scientific Information Platform. Advanced Architectures and Solutions ed. Bembenik Robert , Skonieczny Łukasz , Rybiński Henryk , Kryszkiewicz Marzena , Niezgódka Marek , , Berlin, Heidelberg, SPRINGER-VERLAG, 2013
  25. Fedoryszak Mateusz , Bolikowski Łukasz , Tkaczyk Dominika , Wojciechowski Krzysztof , Methodology for Evaluating Citation Parsing and Matching W: Intelligent Tools for Building a Scientific Information Platform. Advanced Architectures and Solutions , Netherlands, Springer Berlin Heidelberg, 2013
  26. Cohen Albert , DeVore Ronald , Petrova Guergana , Wojtaszczyk Przemysław , Finding the minimum of a function, Methods and Applications of Analysis, 2013, 20, s. 365-382
  27. Batorski Dominik , Diagnoza Społeczna 2013. Warunki i jakosc życia Polaków, Współczesna Ekonomia. Contemporary Economics, 2013, 7, s. 328-352
  28. Kruczyk Marcin , Umer Hausen , Enroth Stefan , Komorowski Jan , Komorowski Jan , Peak Finder Metaserver - a novel application for finding peaks in ChIP-seq data, BMC BIOINFORMATICS, 2013, 14, s. 280
  29. Bornelov Susanne , Saaf Annika , Melen Erik , Bergstrom Anna , Moghadam Behrooz , Pulkkinen Ville , Acevedo Nathalie , Pietras Christina , Ege Markus , Braun-Fahrlander Charlotte , Riedler Josef , Doekes Gert , Kabesch Michael , von Hage Marianne , Kere Juha , Scheynius Annika , Soderhall Cilla , Pershagen Goran , Komorowski Jan , Rule-Based Models of the Interplay between Genetic and Environmental Factors in Childhood Allergy, PLoS One, 2013, 8, s. 80080
  30. Bysani Madhusudhan , Wallerman Ola , Bornelov Susanne , Zatloukal Kurt , Komorowski Jan , Wadelius Claes , ChIP-seq in steatohepatitis and normal liver tissue identifies candidate disease mechanisms related to progression to cancer, BMC Medical Genetics, 2013, 6, s. 1-14
  31. Strąk Paweł , Kempisty Paweł , Ptasińska Maria , Krukowski Stanisław , Krukowski Stanisław , DFT modeling of AlN/GaN multi-quantum wells, PHYSICA STATUS SOLIDI C-CONFERENCES, 2013, 10, s. 323-326
  32. Krukowski Stanisław , Krukowski Stanisław , Kempisty Paweł , Strąk Paweł , Foundations of ab initio simulations of electric charges and fields at semiconductor surfaces within slab models, Journal of Applied Physics, 2013, 114, s. 1-10
  33. Meyer P. , Siwo G. , Zeevi D. , Sharon D. , Norel R. , Promoter Prediction Consortium DREAM6 , Kursa Miron , Rudnicki Witold , Segal E. , Stolovitzky G. , Inferring gene expression from ribosomal promoter sequences, a crowdsourcing approach, Genome Research, 2013, 23, s. 1928-1937
  34. Trykozko Anna , Peszyńska Małgorzata , Pore-Scale Simulations of Pore Clogging and Upscaling with Large Velocities W: The proceedings of Fifth Polish-Japanese Days on Nonlinear Analysis in Interdisciplinary Sciences-Modellings, Theory and Simulations ed. Aiki Toyohiko , Fukao Takeshi , Kenmochi Nobuyuki , Niezgódka Marek , Ôtani Mitsuharu , , Tokyo, Gakkotosho, 2013, s. 340
  35. Fedoryszak Mateusz , Tkaczyk Dominika , Bolikowski Łukasz , Large Scale Citation Matching Using Apache Hadoop W: Research and Advanced Technology for Digital Libraries , Heidelberg, Springer Berlin Heidelberg, 2013
  36. Kawa Adam , Bolikowski Łukasz , Czeczko Artur , Dendek Piotr , Tkaczyk Dominika , Data model for analysis of scholarly documents in the MapReduce paradigm W: Intelligent Tools for Building a Scientific Information Platform ed. Bembenik Robert , Skonieczny Łukasz , RYBIŃSKI Henryk , KRYSZKIEWICZ Marzena , Niezgódka Marek , , Berlin-Heidelberg, Springer-Verlag, 2013, s. 548
  37. Nowicki Marek , Bała Piotr , PCJ - New Approach for Parallel Computations in Java W: Applied Parallel and Scientific Computing , Helsinki, Finland, 2013
  38. Narębski Jakub , Bała Piotr , Adding support for CUFFT library to GENE W: Proceedings of the work in progress session held in connection with the 21st EUROMICRO International Conference on Parallel, Distributed and Network-based processing PDA 2013, Belfast, February 27 - March 1, 2013 , Linz, SEA Linz, 2013
  39. Borcz Marcelina Maria , Kluszczyński Rafał , Marczak Grzegorz , Chrupała Rafał , Benedyczak Krzysztof , Skonieczna Katarzyna , Grzybowski Tomasz , Bała Piotr , PL-Grid services for bioinformatics community. W: CGW'13 Proceedings , Kraków, ACK Cyfronet AGH, Kraków, 2013
  40. Intelligent Tools for Building a Scientific Information Platform ed. Bembenik Robert , Skonieczny Łukasz , RYBIŃSKI Henryk , KRYSZKIEWICZ Marzena , Niezgódka Marek , , Berlin-Heidelberg, Springer-Verlag, 2013
  41. Sołtys Jakub , Piechota Jacek , Łopuszyński Michał , Krukowski Stanisław , Density functional theory (DFT) study of Zn, O2 and O adsorption on polar ZnO(0001) and ZnO(0001) surfaces, Journal of Crystal Growth, 2013, 374, s. 53-59
  42. Bała Piotr , Benedyczak Krzysztof , Kluszczyński Rafał , Marczak Grzegorz , Advancements in UNICORE Accounting W: UNICORE Summit 2013 Proceedings ed. Huber Valentina , Müller-Pfefferkorn Ralph , Romberg Mathilde , , Julich, Forschungszentrum Jülich GmbH, 2013, s. 94
  43. Fenrich Wojciech , Nowiński Aleksander , Zamłyńska Katarzyna , Sylwestrzak Wojtek , POL-index - Polska Baza Cytowań W: Bibliograficzne bazy danych i ich rola w rozwoju nauki, Poznań, 17-19 kwietnia 2013 ed. Sójkowska Iwona , Derfert-Wolf Lidia , , 2013
  44. Weirauch Matthew , Cote Atina , Norel Raquel , Annala Matti , Zhao Yue , Riley Todd , Saez-Rodriguez Julio , Cokelaer Thomas , Vedenko Anastasia , Talukder Shaheynoor , Consortium DREAMS5 , Bussemaker Harmen , Morris Quaid , Bulyk Martha , Stolovitzky Gustavo , Hughes Timothy , Kursa Miron , Rudnicki Witold , Evaluation of methods for modeling transcription factor sequence specificity., NATURE BIOTECHNOLOGY, 2013, 3, s. 126-134
  45. Kluszczyński Rafał , Borcz Marcelina Maria , Marczak Grzegorz , Stolarek Marcin , Bała Piotr , A Data Storage Solution Using the PL-Grid UNICORE Infrastructure W: UNICORE Summit 2013 Proceedings ed. Huber Valentina , Müller-Pfefferkorn Ralph , Romberg Mathilde , , Julich, Forschungszentrum Jülich GmbH, 2013, s. 94
  46. Intelligent Tools for Building a Scientific Information Platform:Advanced Architectures and Solutions ed. Bembenik Robert , Skonieczny Łukasz , Rybiński Henryk , Kryszkiewicz Marzena , Niezgódka Marek , , Springer Berlin Heidelberg, 2013
  47. Borcz Marcelina Maria , Kluszczyński Rafał , Skonieczna Katarzyna , Grzybowski Tomasz , Bała Piotr , Processing the Biomedical Data on the Grid Using the UNICORE Workflow System W: Euro-Par 2012: Parallel Processing Workshops , Heidelberg, Springer- Verlag Berlin, Heidelberg, 2013
  48. Borcz Marcelina , Kluszczyński Rafał , Skonieczna Katarzyna , Grzybowski Tomasz , Bała Piotr , Processing the biomedical data on the grid using the UNICORE workflow system W: Euro-Par 2012 Workshops , Heidelberg, Springer, Heidelberg, 2013
  49. Nowicki Marek , Matuszak Michal , Kwiatkowska Anna , Sysło Maciej , Bała Piotr , Teaching secondary school students programming using distance learning. A case study. W: WCCE 2013 Learning while we are connected volume 2 - practice papers. WCCE 2013 - 10th IFIP World Conference on Computer in Education, Toruń, Poland, July 1-7, 2013 , Toruń, Nicolaus Copernicus University Press, Toruń, 2013
  50. Nowicki Marek , Bała Piotr , PCJ - a PGAS library for Java W: Proceedings of the 7th International Conference on PGAS Programming Models , Edinburgh, The University of Edinburgh, 2013
  51. Nowicki Marek , Mikulski Łukasz , Piątkowski Marcin , Kluszczyński Rafał , Bała Piotr , On-line contests hosting service as a tool to teach computer science students programming W: WCCE 2013 Learning while we are connected. volume 2 - practice papers.WCCE 2013 - 10th IFIP World Conference on Computer in Education, Toruń, Poland, July 1-7, 2013 , Toruń, Nicolaus Copernicus University Press, Toruń, 2013
  52. Walczak Agnieszka , Szczepankiewicz Andrzej A. , Ruszczycki Błażej , Magalska Adriana , Zamłyńska Katarzyna , Dzwonek Joanna , Wilczek Ewa , Zybura-Broda Katarzyna , Rylski Marcin , Malinowska Monika , Dąbrowski Michał , Szczepińska Teresa , Pawłowski Krzysztof , Pyskaty Marta , Włodarczyk Jakub , Szczerbal Izabela , Świtoński Marek , Cremer Marion , Wilczyński Grzegorz M. , Novel Higher-Order Epigenetic Regulation of the Bdnf Gene upon Seizures, JOURNAL OF NEUROSCIENCE, 2013, 33, s. 2507-2511
  53. Kwiatkowski Mirosław , Kursa Miron , Szczygieł Ryszard , Prognozowanie wartości wilgotności ściółki jako narzędzie wspierające organizację ochrony przeciwpożarowej lasu W: Zagrożenia lasów zależne od stanu atmosfery ed. Lech Paweł , Kwiatkowski Mirosław , Zachara Tadeusz , , Sękocin Stary, Instytut Badawczy Leśnictwa, 2013, s. 17-29
  54. Zasada Michał , Stereńczak Krzysztof , Dudek Wojciech Michał , Rybski Aleksander , Horizon visibility and accuracy of stocking determination on circular sample plots using automated remote measurement techniques, FOREST ECOLOGY AND MANAGEMENT, 2013, 302, s. 171-177
  55. Kruczyk Marcin , Baltzer Nicholas , Mieczkowski Jakub , Dramiński Michal , Koronacki Jacek , Komorowski Jan , Random Reducts: A Monte Carlo Rough Set-based Method for Feature Selection in Large Datasets, FUNDAMENTA INFORMATICAE, 2013, 127, s. 273-288
  56. Treder Waldemar , Jakubiak Bogumił Jerzy , Klamkowski Krzysztof , Rudnicki Witold , Kursa Miron , Tryngiel-Gać Anna , Prognoza potrzeb wodnych – internetowa platforma prognozowania potrzeb wodnych roślin sadowniczych zrealizowana w ramach projektu PROZA, Infrastruktura i Ekologia Terenów Wiejskich - Infrastructure and Ecology of Rural Areas, 2013, s. 115-125
  57. Łabędzki Leszek , Bąk Bogdan , Liszewska Małgorzata , Wpływ przewidywanej zmiany klimatu na zapotrzebowanie ziemniaka późnego na wodę, Infrastruktura i Ekologia Terenów Wiejskich - Infrastructure and Ecology of Rural Areas, 2013, s. 155-165
  58. Intelligent Tools or Building a Scientific Information Platform - Advanced Architectures and Solutions ed. Bembenik Robert , Skonieczny Lukasz , Rybiński Henryk , Kryszkiewicz Marzena , Niezgódka Marek , , Berlin - Heidelberg - New York - Dordrecht - London, Springer-Verlag, 2013
  59. Załuska-Kotur Magdalena , Krzyżewski Filip , Krukowski Stanisław , Czarnecki Robert , Leszczyński Michał , Structures Built by Steps Motion during Sublimation from Annealed GaN(0001) Surface, CRYSTAL GROWTH & DESIGN, 2013, 13, s. 1006-1013
  60. Kwiatkowski Kamil , Górecki Bartosz , Korotko Jakub , Gryglas Wojciech , Dudyński Marek , Bajer Konrad , Numerical modeling of biomass pyrolysis - Heat and mass transport models, NUMERICAL HEAT TRANSFER PART A-APPLICATIONS, 2013, 64, s. 216-234
  61. Wojtaszczyk Przemysław , Petrova Guergana , DeVore Ronald , Greedy Algorithms for Reduced Basis in Banach Spaces, CONSTRUCTIVE APPROXIMATION, 2013
  62. Modrzejewski Marcin , Rajchel Łukasz , Szczęśniak Małgorzata , Chałasiński Grzegorz , Density-Dependent Onset of the Long-Range Exchange: A Key to Donor–Acceptor Properties, JOURNAL OF PHYSICAL CHEMISTRY A, 2013, 117, s. 11580-11586
  63. Załuska-Kotur Magdalena , Krzyżewski Filip , Krukowski Stanisław , Czernecki Robert , Leszczyński Michał , Structures Built by Steps Motion during Sublimation from Annealed GaN(0001) Surface, CRYSTAL GROWTH & DESIGN, 2013, 13, s. 1006-1013
  64. Malinowski Szymon , Gerber Hermann E. , Jen-La Plante Imai , Kopeć Marta Ewa , Kumala Wojciech , Nurowska Katarzyna , Chuang Patrick , Khelif Djamal , Haman Krzysztof , Physics of Stratocumulus Top (POST): turbulent mixing across capping inversion, Atmospheric Chemistry and Physics, 2013, 13, s. 12171-12186
  65. Rybiński Mikołaj Jakub , Szymańska Zuzanna , Lasota Sławomir , Gambin Anna , Modelling the efficacy of hyperthermia treatment, Journal of the Royal Society Interface, 2013, 10
  66. Łukasik Michał , Kuśmierczyk Tomasz , Bolikowski Łukasz , Nguyen Hung Son , Hierarchical, Multi-label Classification of Scholarly Publications: Modifications of ML-KNN Algorithm W: Intelligent Tools for Building a Scientific Information Platform. Advanced Architectures and Solutions ed. Bembenik Robert , Skonieczny Łukasz , Rybiński Henryk , Kryszkiewicz Marzena , Niezgódka Marek , , Berlin, Heidelberg, SPRINGER-VERLAG, 2013
  67. Kuśmierczyk Tomasz , Łukasik Michał , Bolikowski Łukasz , Nguyen Hung Son , Comparing Hierarchical Mathematical Document Clustering against the Mathematics Subject Classification Tree W: Intelligent Tools for Building a Scientific Information Platform. Advanced Architectures and Solutions ed. Bembenik Robert , Skonieczny Łukasz , Rybiński Henryk , Kryszkiewicz Marzena , Niezgódka Marek , , Berlin, Heidelberg, SPRINGER-VERLAG, 2013
  68. Romanowska Julia , Reuter Nathalie , Trylska Joanna , Comparing aminoglycoside binding sites in bacterial ribosomal RNA and aminoglycoside modifying enzymes, PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2013, 81, s. 63-80
  69. Kwiatkowski Kamil , Krzysztoforski Krzysztof , Bajer Konrad , Dudyński Marek , Bioenergy from feathers gasification - Efficiency and performance analysis, BIOMASS & BIOENERGY, 2013, 59, s. 402-411
  70. Kwiatkowski Kamil , Dudyński Marek , Bajer Konrad , Combustion of Low-Calorific Waste Biomass Syngas, FLOW TURBULENCE AND COMBUSTION, 2013, 91, s. 749-772